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Re: HLA (A,B,C,Dr,DQ) typing via sequence software
by Fetch-Rover-Fetch@[EMAIL PROTECTED]
Nov 15, 2004 at 08:39 PM
| wheat wrote:
> Peter Claussen wrote:
>
>> In article <pt-dnZj3KJo0kRHcRVn-tQ@[EMAIL PROTECTED]
>,
>> Fetch-Rover-Fetch@[EMAIL PROTECTED]
wrote:
>>
>>> anyone know of *any* commercial, shareware, or freeware software to
>>> do this task?? Mac or Pc
>>
>> If I understand the question, then you're looking for something like
>> the software ****tion of this:
>>
http://www4.amershambiosciences.com/aptrix/upp01077.nsf/Content/150294ABE
>> BB84061C1256BEC003020E3/$FILE/HLAtyp.pdf
>>
>
> There are several trace file readers including 4Peaks, which give raw
> sequence.
> From there, the alignment can be done quite easily with BioPerl or
> SequenceAnalysis (see apple site- scientific dowloads).
>
> Cheers.
Thanks!
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16 Posts in Topic:
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Fetch-Rover-Fetch@[EMAIL |
2004-11-05 18:28:38 |
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Tom Harrington <tph@[E |
2004-11-05 16:38:16 |
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nomail@[EMAIL PROTECTED]
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2004-11-06 01:04:51 |
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Tom Harrington <tph@[E |
2004-11-06 14:20:49 |
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nomail@[EMAIL PROTECTED]
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2004-11-07 00:02:48 |
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Peter Claussen <boots@ |
2004-11-05 18:29:08 |
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Fetch-Rover-Fetch@[EMAIL |
2004-11-06 08:33:18 |
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Perfidious Albion <nob |
2004-11-07 01:52:53 |
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Peter Claussen <boots@ |
2004-11-07 08:27:37 |
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Fetch-Rover-Fetch@[EMAIL |
2004-11-07 10:23:04 |
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wheat <harvest-this@[E |
2004-11-15 18:29:56 |
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Fetch-Rover-Fetch@[EMAIL |
2004-11-15 20:39:09 |
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%steve%@[EMAIL PROTECTED] |
2004-11-07 12:36:22 |
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"Creation" < |
2005-02-01 07:16:27 |
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"Fetch, Rover, Fetch |
2005-02-01 21:36:34 |
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"Creation" < |
2005-02-03 07:05:11 |
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